Flexible composition and execution of high performance, high fidelity multiscale biomedical simulations

نویسندگان

  • Derek Groen
  • Joris Borgdorff
  • Carles Bona-Casas
  • James Hetherington
  • Rupert W. Nash
  • Stefan J. Zasada
  • Ilya Saverchenko
  • Mariusz Mamonski
  • Krzysztof Kurowski
  • Miguel O. Bernabeu
  • Alfons G. Hoekstra
  • Peter V. Coveney
چکیده

Multiscale simulations are essential in the biomedical domain to accurately model human physiology. We present a modular approach for designing, constructing and executing multiscale simulations on a wide range of resources, from laptops to petascale supercomputers, including combinations of these. Our work features two multiscale applications, in-stent restenosis and cerebrovascular bloodflow, which combine multiple existing single-scale applications to create a multiscale simulation. These applications can be efficiently coupled, deployed and executed on computers up to the largest (peta) scale, incurring a coupling overhead of 1-10% of the total execution time.

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عنوان ژورنال:
  • Interface focus

دوره 3 2  شماره 

صفحات  -

تاریخ انتشار 2013